FCS Express  has new advanced transformation and cluster analysis features that will allow you to perform to following transformation in an easy to use interface.

 

Parameter Math

K-Means cluster analysis

Principal Component Analysis (PCA)

R Integration for adding new parameters and cluster transformations

tSNE

SPADE

 

 

Example of tSNE transformed data set with new color based on overlay option applied below.

tSNEDensity2