The Transformations navigator is access via the Tools tab→Transformations→Transformations button. The transformations navigator (Figure 29.1) will launch and new data transformations may be added by clicking on the down arrow next to the blue plus button. The following transformations are currently available in FCS Express:
•Principal Component Analysis (PCA)
•R Integration for adding new parameters and cluster transformations
•Please also note our sections on Merging / Concatenating files which is often used for tSNE and SPADE data sets.
Figure 29.1 - The transformations navigator in FCS Express. Clicking on the down arrow next to the blue plus button allows access to a variety of transformations.